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RE: NONMEM on HPC at the University of Chicago

From: Chang, Cheng <Cheng.Chang>
Date: Mon, 26 Sep 2016 18:08:32 +0000

Hi Beth,
NONMEM executable directory doesn't not need to be writable. Just make sure=
 the key directories (~/nm73/run; ~/nm73/tr) as well as the fortran compile=
r are in the system's PATH and you should be fine.

Best of Luck,

Cheng Chang, Ph.D.
Systems Modeling & Simulation
Department of Pharmacokinetics, Dynamics and Metabolism Pfizer Inc.
Groton, CT
(860) 686-9240

-----Original Message-----
From: owner-nmusers
 Behalf Of Eicher, Beth L [CRI]
Sent: Monday, September 26, 2016 1:17 PM
To: nmusers
Subject: [NMusers] NONMEM on HPC at the University of Chicago


I am a system administrator with the Center for Research Informatics, Biolo=
gical Sciences Division, of the University of Chicago. We have a High Perfo=
rmance Computing cluster using Red Hat Enterprise Linux 6. We desire to use=
 NONMEM with PsN and cPirana at the Linux command line for single node and =
MPI jobs using ifort 14.

I am here to network with similar site with this type of installation. Also=
, I hope to see if there are any other users of NONMEM at the University of=
 Chicago who may be interested in using this on the cluster as well as your=
 lab's stand-alone workstation license.

My first question for this list is...
Does nmfe73 have to be in a directory that is write-able?

I am looking forward to working with you all.

Beth Lynn Eicher

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Thank you
University of Chicago Medicine and Biological Sciences
Received on Mon Sep 26 2016 - 14:08:32 EDT

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