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RE: [NMusers] NONMEM installation error on OS X EI Capitan

From: Bauer, Robert <Robert.Bauer_at_iconplc.com>
Date: Sat, 24 Oct 2015 17:41:10 +0000

Alison Boeckmann will attempt to install El Capitan on her Mac to determine what needs to be done.

Meanwhile, did you also update to the corresponding version of Xcode?

Robert J. Bauer, Ph.D.
Vice President, Pharmacometrics R&D
ICON Early Phase
Office: (215) 616-6428
Mobile: (925) 286-0769
Robert.Bauer_at_iconplc.com<mailto:Robert.Bauer_at_iconplc.com>
www.iconplc.com<http://www.iconplc.com>

From: owner-nmusers_at_globomaxnm.com [mailto:owner-nmusers_at_globomaxnm.com] On Behalf Of Tingjie Guo
Sent: Wednesday, October 21, 2015 9:04 AM
To: nmusers_at_globomaxnm.com
Subject: [NMusers] NONMEM installation error on OS X EI Capitan

Dear NMusers,

Recently I upgraded my Mac to OS X EI Capitan, yet this broke the installation of NONMEM like last year when I upgraded my Mac to Yosemite. I tried to reinstall NONMEM but with error. The following is how I did.

1) I prefer to take gcc/gfortran binaries from High Performance Computing for Mac OS X (http://hpc.sourceforge.net/<http://hpc.sourceforge.net/>). The latest gcc/gfortran 5.2 for EI Capitan were installed by command sudo tar -xvf gcc-5.2-bin.tar.gz -C / and sudo tar -xvf gfortran-5.2-bin.tar.gz -C /. This step was successful. I tested in terminal by running gfortran -v, it showed the right returns.

2) Then I tried to install NONMEM by command sudo /bin/bash setup73 [NONMEM source path] [Target path] gfortran y /opt/local/bin/ar same rec i unzip nonmem73e.zip<http://nonmem73e.zip> nonmem73r.zip<http://nonmem73r.zip>.

When it came to Step 10. Build NONMEM archive nm/nonmem.a, it showed like this:

Step 10. Build NONMEM archive nm/nonmem.a
NMTRAN.exe was not created

Please look for error messages in /opt/nm73/compilemsgs.txt and /opt/nm73/finishmsgs.txt
Installation Aborted

The attachments are compilemsgs.txt and finishmsgs.txt. I'm not very clear about the error messages, it seems that there is still something wrong with gcc/gfortran. There is nothing different in setting gcc/gfortran this time compare to before. So I have no idea about this issue.
Is there any experience about this problem? And any advice would be appreciated.

Thanks!
Tingjie

Tingjie Guo
M.S. Candidate
Peking University/Pfizer Pharmacometrics Education Centre
Department of Pharmaceutics, School of Pharmaceutical Sciences
Peking University, Beijing, China
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Received on Sat Oct 24 2015 - 13:41:10 EDT

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