NONMEM Users Network Archive

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Re: [NMusers] PSN error

From: Ting-Jie GUO <tjie.guo_at_gmail.com>
Date: Sat, 7 Feb 2015 10:39:29 +0800

Hi Ravi,

Personally I prefer to install gcc/gfortran-NONMEM-Perl/Perl modules-PsN
step by step as it's easy to test the error. I notice the error contains
"No file C:\COMBINED_PK_PD_Feb3rd.CSV on disk", please make sure the name
of input file in the $DATA block is in accordance with your data set. If
this can not solve the issue, from my own experiences, you may check if
Perl configuration is corrupted or not and reinstall PsN independently.

Sincerely,

--
*Ting-Jie GUO*
M.S. Candidate

Group of Pharmacometrics

School of Pharmaceutical Sciences
Peking University, China

On 7 February 2015 at 00:22, Singh,Ravi Shankar <ravi.singh_at_ufl.edu> wrote:

> Hi Everyone:
>
> I am trying to run NONMEM using PsN and I get and error "No file
> C:\COMBINED_PK_PD_Feb3rd.CSV on disk. at C:\Perl\site\lib/PsN_4_2_0/
> data.pm line 128". The psn.conf file (shown below) was created
> automatically during install and seems to have NONMEM correctly mapped. In
> the past, I have been able to use PSN with regular install of NONMEM 7.2
> but I am using easy install of NONMEM 7.3 this time. I wonder if this issue
> is related to easy install or NONMEM 7.3. Any help is greatly appreciated.
>
> Thanks,
>
> Best regards,
>
> Ravi
>
>
>
>
>
>
>
> job_polling_interval=1
> output_style=SPLUS
>
> [default_bootstrap_options]
> bca_confidence_intervals_check=0
> bca_confidence_intervals_level=5
> covariance_step_successful_limit=0.8
> covariance_step_warnings_limit=0.2
> estimate_near_boundary_limit=0.2
> large_bias_limit=0.05
> minimization_successful_limit=0.8
> percentile_confidence_intervals_check=0
> percentile_confidence_intervals_level=5
> se_confidence_intervals_check=0
> se_confidence_intervals_level=5
> skip_covariance_step_terminated=0
> skip_estimate_near_boundary=1
> skip_minimization_terminated=1
> skip_with_covstep_warnings=0
>
> [default_cdd_options]
> outside_n_sd_check=2
> xv=0
>
> [default_execute_options]
> check_nmtran=1
> display_iterations=1
>
> [default_gls_options]
> samples=30
>
> [default_lasso_options]
> maxevals=50000
> retries=5
>
> [default_llp_options]
> omega_interval_ratio_check=1.6
> sigma_interval_ratio_check=1.6
> theta_interval_ratio_check=1.3
> within_interval_check=0
>
> [default_options]
> nm_output=ext,cov,cor,coi,phi
> nmfe=1
> threads=5
>
> [default_sumo_options]
> c_level=95
> condition_number_limit=1000
> correlation_limit=0.9
> large_omega_cv_limit=0.50
> large_sigma_cv_limit=0.30
> large_theta_cv_limit=0.30
> near_bound_sign_digits=2
> near_zero_boundary_limit=0.001
> precision=4
> sd_rse=1
> sign_digits_off_diagonals=2
>
> [nm_versions]
> NM73=C:/nm73g64,7.3
> default=C:/nm73g64,7.3
>
>
>
>

Received on Fri Feb 06 2015 - 21:39:29 EST

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